jongseo-park
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alphafold Public
Forked from google-deepmind/alphafoldOpen source code for AlphaFold.
Python Apache License 2.0 UpdatedMay 17, 2024 -
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ColabFold Public
Forked from sokrypton/ColabFoldMaking Protein folding accessible to all!
Jupyter Notebook MIT License UpdatedJul 4, 2022 -
cryolo_stars2star Public
Convert crYOLO star files to a star file compatible with cryoSPARC.
Python UpdatedJun 19, 2022 -
DALI_prepare Public
The script for preparing the databases for local version of DALI that is a program for comparing protein structures in 3D.
Python UpdatedDec 13, 2021 -
fetch_af Public
Directly open PDB files from AlphaFold database using PyMOL.
Python UpdatedDec 28, 2021 -
gmx_makecyclictop Public
Forked from visvaldask/gmx_makecyclictopThis script makes a cyclic peptide or cyclic nucleotide topology file for GROMACS out of (specially prepared) linear molecule topology file
Perl MIT License UpdatedNov 24, 2020 -
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ProteinMPNN Public
Forked from dauparas/ProteinMPNNCode for the ProteinMPNN paper
Python MIT License UpdatedAug 18, 2022 -
pymol-color-alphafold Public
Forked from cbalbin-bio/pymol-color-alphafoldPyMOL extension to color AlphaFold structures by confidence (pLDDT).
Python MIT License UpdatedJul 10, 2023 -
pymol-psico Public
Forked from YoshitakaMo/pymol-psicoPymol ScrIpt COllection (PSICO)
Python BSD 2-Clause "Simplified" License UpdatedDec 27, 2021 -
PymolFold Public
Forked from JinyuanSun/PymolFoldProtein folding in Pymol
Python MIT License UpdatedNov 3, 2022 -
pymolplugin Public
Forked from YoshitakaMo/pymolpluginDirectory of pymol plugins
Python UpdatedNov 2, 2020 -
RFDesign Public
Forked from RosettaCommons/RFDesignProtein hallucination and inpainting with RoseTTAFold
Python Other UpdatedOct 3, 2022