-
Notifications
You must be signed in to change notification settings - Fork 1
Issues: hepcat72/vcfSampleCompare
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Author
Label
Projects
Milestones
Assignee
Sort
Issues list
Files merged via
bcftools merge
can result in errors
bug
high priority
#23
by hepcat72
was closed Dec 5, 2019
Add a pair summary at the top of the output in a comment section
enhancement
low priority
#21
by hepcat72
was closed May 16, 2019
Implement weighted score/sorting
duplicate
enhancement
high priority
#20
by hepcat72
was closed May 3, 2019
Weighted scores for sorting instead of sub-sorting
enhancement
high priority
#19
by hepcat72
was closed May 13, 2019
Handle the case where all obs rats are the same between the 2 groups
bug
low priority
#15
by hepcat72
was closed May 14, 2019
Order the samples in each sample group based on the original order in the vcf file header
enhancement
medium priority
#14
by hepcat72
was closed Apr 12, 2019
Add a "penalize depths below" option
enhancement
medium priority
#12
by hepcat72
was closed Apr 30, 2019
Make the sub-sort be on allelic frequency instead of average depth
enhancement
high priority
#11
by hepcat72
was closed Apr 29, 2019
Base the score in genotype mode on the ratio of resolution
enhancement
high priority
#10
by hepcat72
was closed May 10, 2019
Base the separation gap on max/min difference instead of the difference in the averages
enhancement
high priority
#9
by hepcat72
was closed Apr 12, 2019
Make pair identifier unique for groupings when -s not provided
enhancement
low priority
#8
by hepcat72
was closed May 15, 2019
Add algorithm description for sorting & filtering
enhancement
high priority
#7
by hepcat72
was closed Apr 11, 2019
If there's only 1 sample, requiring hits<1 makes no sense
enhancement
#2
by hepcat72
was closed Sep 21, 2018
ProTip!
What’s not been updated in a month: updated:<2024-09-12.