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Issues list

-gxe output
#286 opened Oct 4, 2024 by liaguiro
1 of 10 tasks
1
relatedness matrix
#285 by liaguiro was closed Oct 4, 2024
1 of 10 tasks
1
random effects
#284 opened Aug 22, 2024 by paolozambonelli
GEMMA for UK Biobank genome-wide analysis?
#283 opened Aug 7, 2024 by jielab
1
##ERROR: FAILED: Parsing input file 'mikk_small_hapVariants_updated_noheaders.csv' failed in function ReadFile_geno in src/gemma_io.cpp at line 744, for GEMMA 0.98.5 (2021-08-25) by Xiang Zhou, Pjotr Prins and team (C) 2012-2021
#282 opened Jun 4, 2024 by fetche-lab
10 tasks done
2
BIMBAM format (preferred)
#281 opened Apr 4, 2024 by Sh1ne111
Identical P-Values at end of run
#280 opened Mar 21, 2024 by jeremysutherland
1
ERROR: Enforce failed for Problem reading FAM file (phenotypes do not match geno file) in src/gemma_io.cpp at line 600 in ReadFile_fam GEMMA 0.98.3 (2020-11-28) by Xiang Zhou and team (C) 2012-2020
#279 opened Jan 3, 2024 by liuye2024
The problem of filtering snp parameters
#278 opened Dec 28, 2023 by hhd1008611
1
Why the diagonal of relatedness matrix is not equal to 1 or a constant value?
#277 opened Jun 26, 2023 by xiekunwhy
1
WARNING: Brent did not converge
#276 opened May 31, 2023 by MWQ1224
1
GSL ERROR: function value is not finite in brent.c at line 58 errno 9
#275 opened Apr 20, 2023 by zhoufc213
gsl: newton.c:88: ERROR: function value is not finite 3.08%
#274 opened Apr 19, 2023 by jenny315
Got a nan in the p-value results
#273 opened Apr 11, 2023 by voichek
1
gemma-wrapper:279:in `<main>': Expected GEMMA -a genotype file switch (RuntimeError)
#272 opened Apr 2, 2023 by KizBaolin
Pve is .999
#271 opened Mar 31, 2023 by aguilar-gomez
9 of 10 tasks
1
Categorical covariates
#270 opened Mar 24, 2023 by AlexandreHUBERT17
The input files includes 26 linkage groups but the output files only includes 22 linkage group
#267 opened Mar 4, 2023 by yingxins
very low number of analyzed SNPs/var
#266 opened Oct 5, 2022 by xbarvazx
Gemma run-time for Estimate Relatedness Matrix calculation
#265 opened Jun 6, 2022 by alviitayyaba
basic usage doesn't work
#264 by sql647 was closed May 29, 2022
long haplotype as population structure
#263 opened May 18, 2022 by amsamani
Enforce failed for number of analyzed individuals equals 0. in src/param.cpp at line 2073 in ProcessCvtPhen
#262 opened Apr 11, 2022 by zeroLB
2 of 10 tasks
2
Parsing input file '' failed in function AnalyzeBimbamGXE Support: use google groups instead
#261 opened Feb 21, 2022 by MaxiEstravis
1
Issue with GEMMA-Wrapper
#260 opened Dec 23, 2021 by vinod1981
1
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