restrict to numpy version 1.26.4 maximum. Numpy > v2 does not result …

…in correct output
erdogant · Aug 28, 2024 · f45ef1b · f45ef1b
1 parent a09c7a2
commit f45ef1b
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diff --git a/findpeaks/examples.py b/findpeaks/examples.py
@@ -82,7  82,7 @@
 from findpeaks import findpeaks
 rng = np.random.default_rng(42)
 x = rng.normal(size=(50, 50))
-x = gaussian_filter(x, sigma=10.)
 x = gaussian_filter(x, sigma=10)
 # peak and valley
 fp = findpeaks(method="topology", whitelist=['peak', 'valley'], denoise=None, verbose=3)
 results = fp.fit(x)

diff --git a/findpeaks/stats.py b/findpeaks/stats.py
@@ -436,6  436,7 @@ def topology(X, limit=None, reverse=True, verbose=3):
     # It is important to ensure unique values because the method sorts the values and only unique values are processed.
     # Without adjusting duplicated values, peaks with exactly the same height will be skipped.
     X = _make_unique(X)
     # X = np.maximum(X   ((X>0).astype(int) * np.random.rand(X.shape[0], X.shape[1])/10), 0)
 
     # Get indices orderd by value from high to low
     indices = [(i, j) for i in range(h) for j in range(w) if _get_indices(X, (i, j)) is not None and _get_indices(X, (i, j)) >= limit]

diff --git a/requirements.txt b/requirements.txt
@@ -1,6  1,6 @@
 scipy
 matplotlib
-numpy
 numpy==1.26.4
 pandas
 tqdm
 requests

diff --git a/setup.py b/setup.py
@@ -15,7  15,7 @@
 setuptools.setup(
      install_requires=['scipy',
                        'matplotlib',
-                       'numpy',
                        'numpy==1.26.4',
                        'pandas',
                        'tqdm',
                        'requests',