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Achievement: Pair ExtraordinaireAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: YOLO

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  • configs Public

    Forked from nf-core/configs

    Config files used to define parameters specific to compute environments at different Institutions

    Nextflow MIT License Updated Nov 8, 2024

  • MultiQC Public

    Forked from MultiQC/MultiQC

    Aggregate results from bioinformatics analyses across many samples into a single report.

    JavaScript GNU General Public License v3.0 Updated Nov 4, 2024

  • synteny Public

    Forked from Eco-Flow/synteny

    A Nextflow pipeline for running synteny analysis.

    Perl Other Updated Nov 2, 2024

  • genomeqc Public

    Forked from nf-core/genomeqc

    Compare the quality of multiple genomes, along with their annotations.

    Nextflow MIT License Updated Oct 30, 2024

  • modules Public

    Forked from nf-core/modules

    Repository to host tool-specific module files for the Nextflow DSL2 community!

    Nextflow MIT License Updated Oct 28, 2024

  • website Public

    Forked from nf-core/website

    Code and files for the main nf-core website.

    Astro MIT License Updated Oct 15, 2024

  • conda Public

    Place to test conda builds

    Updated Sep 5, 2024

  • test-datasets Public

    Forked from nf-core/test-datasets

    Test data to be used for automated testing with the nf-core pipelines

    MIT License Updated Aug 31, 2024

  • Protein_blast_and_taxonomy Public

    Nextflow pipeline to retrieve family level names for each protein

    Perl 1 Updated Aug 5, 2024

  • Bombus_impatiens Public

    Repo of Bombus genome and toxicity exposure

    R MIT License Updated Jul 30, 2024

  • chriswyatt1 Public

    Updated Jul 15, 2024

  • NCBI_genome_upload Public

    A help repo for uploading a single genome

    Updated Jun 17, 2024

  • jcvi Public

    Forked from tanghaibao/jcvi

    Python library to facilitate genome assembly, annotation, and comparative genomics

    Python BSD 2-Clause "Simplified" License Updated Jun 15, 2024

  • silhouette Public

    Make a png into various types of silhouette for scientific figures

    Python MIT License Updated Jun 12, 2024

  • nf-training-public Public

    Forked from nextflow-io/training

    Nextflow training material

    Nextflow Other Updated Apr 12, 2024

  • Goatee Public

    Perl 1 1 Updated Mar 7, 2024

  • jcvi_synteny Public

    jcvi old copy

    Perl MIT License Updated Jan 11, 2024

  • docker-build Public

    Dockerfile Updated Jan 10, 2024

  • Eco-Flow.github.io Public

    Forked from Eco-Flow/Eco-Flow.github.io

    Eco-Flow webpage

    Updated Nov 24, 2023

  • nonmodel_genome Public

    Basic data processing of a new non-model genome

    Perl MIT License Updated Mar 13, 2023

  • genomenote Public

    Forked from sanger-tol/genomenote

    This Nextflow DSL2 pipeline takes aligned HiC reads, creates contact maps and a table of statistics.

    Nextflow MIT License Updated Jan 16, 2023

  • Trinity_to_SVM Public

    R Updated Jan 10, 2023

  • liftOver Public

    Run liftover in gitpod

    Python Other Updated Dec 20, 2022

  • my_training Public

    Updated Nov 7, 2022

  • modules2 Public

    Updated Oct 11, 2022

  • rnaseq-nf Public

    Forked from nextflow-io/rnaseq-nf

    A proof of concept of RNAseq pipeline

    Nextflow Mozilla Public License 2.0 Updated Sep 28, 2022

  • genespace-nextflow Public

    Nextflow wrapper for genespace

    Nextflow Other Updated Sep 18, 2022

  • chopgo Public

    Chris Adaptation of Top go

    Perl MIT License Updated Sep 7, 2022

  • Polybia_occidentalis Public

    Shell Updated Aug 9, 2022

  • nextflow_demo Public

    Nextflow Updated Jul 29, 2022