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Pull requests: cggh/scikit-allel

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Pull requests list

Scheduled monthly dependency update for August
#417 opened Aug 1, 2024 by pyup-bot Loading…
Numpy2 compatibility fixes
#416 opened Jul 11, 2024 by benjeffery • Draft
1
2
Add check for gnw with shape[0] of 1 ref issue 337
#338 opened Aug 19, 2020 by hardingnj Loading…
Heterozygosity Blue
#335 opened Aug 11, 2020 by timothymillar Loading…
Add a function for reading a fasta into a dict of numpy arrays
#333 opened Jul 28, 2020 by andrewgwalker Loading…
Fixed Issue #271: Added pathlib.Path support for functions taking a filepath
#332 opened Jul 28, 2020 by smbadiwe Loading…
Write from Zarr to vcf
#299 opened Jan 29, 2020 by giang-nghg Loading…
3
implement tabix region query natively in python
#297 opened Jan 7, 2020 by yangmqglobe • Draft
1
34
Add 3 functions to simulate genotypes/allele counts for quick protyping
#281 opened Jul 23, 2019 by hardingnj Loading…
4
gametic heterozygosity_observed
#279 opened Jul 18, 2019 by timothymillar Loading…
3
Fix for floating point bug in heterozygosity_expected #274
#275 opened Jul 10, 2019 by timothymillar Loading…
1
removal of hmmlearn in favour of pomegranate
#264 opened May 14, 2019 by hardingnj Loading…
1
3
[WIP] Add Dask Implementation of PCA Functions
#259 opened Mar 23, 2019 by eauel Loading…
5
vcf_to_dataframe
#252 opened Jan 12, 2019 by yakkoroma Loading…
2
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