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Neural Networks: Zero to Hero
Snakemake wrapper around the Arima Capture Hi-C (CHiC) workflow
The ultimate resource for becoming a freelancer in Sweden 🇸🇪 👨💻
Productive, portable, and performant GPU programming in Python.
cbrueffer / gridss
Forked from PapenfussLab/gridssGRIDSS: the Genomic Rearrangement IDentification Software Suite
GRIDSS: the Genomic Rearrangement IDentification Software Suite
A collaborative review of the emerging COVID-19 literature. Join the chat here:
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This is the development home of the workflow management system Snakemake. For general information, see
Minimalist Jekyll Template, dark and light themes
Scripts, recipes, and docs for maintaining Conda packages
CloudBioLinux: configure virtual (or real) machines with tools for biological analyses
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
Conda recipes for the bioconda channel.
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…
caret (Classification And Regression Training) R package that contains misc functions for training and plotting classification and regression models
A Python library for phylogenetic scripting, simulation, data processing and manipulation.
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
bedtools - the swiss army knife for genome arithmetic