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Integrate LitVar #421

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2 of 3 tasks
holtgrewe opened this issue Feb 1, 2024 · 1 comment · May be fixed by #509
Open
2 of 3 tasks

Integrate LitVar #421

holtgrewe opened this issue Feb 1, 2024 · 1 comment · May be fixed by #509
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@gromdimon
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enhancement New feature or request javascript Pull requests that update Javascript code python Pull requests that update Python code
Milestone
0.7.0

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@holtgrewe
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holtgrewe commented Feb 1, 2024 •
edited by gromdimon
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Is your feature request related to a problem? Please describe.
PubTator 3 is nice for genes. However, we don't have literature search for variants yet.

Describe the solution you'd like
Integrate LitVar via the API:

  • create api/litvar module
  • implement store/litvar
  • create a SeqvarLitvarCard and integrate it with SeqvarView

Describe alternatives you've considered
N/A

Additional context
@holtgrewe holtgrewe added the enhancement New feature or request label Feb 1, 2024
@holtgrewe holtgrewe modified the milestones: 0.6.0, 0.7.0 Feb 1, 2024
@gromdimon gromdimon self-assigned this Feb 7, 2024
@gromdimon gromdimon linked a pull request Feb 19, 2024 that will close this issue
feat: Integrate LitVar into Seqvar page (#421) #509
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@gromdimon gromdimon added javascript Pull requests that update Javascript code python Pull requests that update Python code labels Feb 21, 2024
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In progress

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enhancement New feature or request javascript Pull requests that update Javascript code python Pull requests that update Python code
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0.7.0
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feat: Integrate LitVar into Seqvar page (#421) bihealth/reev
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@holtgrewe @gromdimon