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sarek Public
Forked from nf-core/sarekAnalysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Nextflow MIT License UpdatedAug 14, 2024 -
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multi-package-containers Public
Forked from BioContainers/multi-package-containersTesting building mulled containers for multi-requirement tools.
UpdatedAug 10, 2023 -
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedAug 9, 2023 -
modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedAug 3, 2023 -
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pipeline-docs Public
Forked from qbic-pipelines/pipeline-docsDocs for QBiC pipelines
UpdatedJul 27, 2023 -
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nf-tools Public
Forked from nf-core/toolsPython package with helper tools for the nf-core community.
Python MIT License UpdatedMay 30, 2023 -
test-datasets Public
Forked from nf-core/test-datasetsTest data to be used for automated testing with the nf-core pipelines
MIT License UpdatedApr 25, 2023 -
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MultiQC Public
Forked from MultiQC/MultiQCAggregate results from bioinformatics analyses across many samples into a single report.
Python GNU General Public License v3.0 UpdatedOct 10, 2022 -
rnadeseq Public
Forked from qbic-pipelines/rnadeseqDifferential gene expression analysis and pathway analysis of RNAseq data
Nextflow MIT License UpdatedAug 18, 2022 -
mhcquant Public
Forked from nf-core/mhcquantIdentify and quantify MHC eluted peptides from mass spectrometry raw data
Nextflow MIT License UpdatedMar 31, 2022 -
master_project Public
Processing of RNA-Seq data with nf-core pipelines and machine learning
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sradownloader Public
Forked from qbic-pipelines/sradownloaderA pipeline to download raw data from SRA
Nextflow MIT License UpdatedJan 14, 2021 -