South Green Bioinformatics platform
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- http://www.southgreen.fr/
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- AgroLD_webapp Public
AgroLD is a RDF knowledge base that consists of data integrated from a variety of plant resources and ontologies. The aim of the Agronomic Linked Data (AgroLD) project is to provide a portal for bioinformatics and domain experts to exploit the homogenized data models towards efficiently generating research hypotheses.
SouthGreenPlatform/AgroLD_webapp’s past year of commit activity - AgroLD_ETL Public
AgroLD is a RDF knowledge base that consists of data integrated from a variety of plant resources and ontologies. AgroLD ETL is the Python packages developed to transform plant datasets in RDF. Packages are developped for data standards such as GFF,GAF, VCF and specific plant databases.
SouthGreenPlatform/AgroLD_ETL’s past year of commit activity - training_SV_teaching Public
Training Detection of SNP and Structural Variants using short and long reads
SouthGreenPlatform/training_SV_teaching’s past year of commit activity - PanExplorer_workflow Public
Snakemake worklow for bacterial pan-genome analysis. It can be run in the back-end of PanExplorer web application
SouthGreenPlatform/PanExplorer_workflow’s past year of commit activity