8436909

Merging develop into master

Mar 10, 2023

97523f8

Merging develop into master

Jul 1, 2023

86016ed

starting with a merge of work done to bring CGNS to compile with C 11

KennethEJansen Jul 31, 2023

7aa1eb9

baby step of copying phGeomBC.cc to phCGNSgbc.cc and makeing the mods…

KennethEJansen Aug 5, 2023

07e45c4

compiles with code to generate PETSc-style-global-node-number =ncorp[…

KennethEJansen Aug 5, 2023

b9e0822

possibly correct (compiles a least) of connectivity data to global nu…

KennethEJansen Aug 5, 2023

81a707b

Cleaned up a few bugs, added useful numbers to the o data structure f…

KennethEJansen Aug 5, 2023

b920292

Added input flag (writeCGNSFiles 1 in adapt.inp) to call writeCGNS th…

KennethEJansen Aug 6, 2023

885d577

opened CGNS file and computed global counts it needs

KennethEJansen Aug 6, 2023

aa48cae

writing coordinates compiles

KennethEJansen Aug 6, 2023

ec7e650

in pretty far over my C skill level at this point....cgns libary s…

KennethEJansen Aug 6, 2023

3a934bb

compiling version that, if I made no errors, will write a CGNS coordi…

KennethEJansen Aug 6, 2023

dac4caa

runs through chef and produces a chefOut.cgns but it crashes paraview…

KennethEJansen Aug 7, 2023

742b226

first big bug squashed but there are more

KennethEJansen Aug 7, 2023

3959fad

fixed the usual -1 c and fortran bug

KennethEJansen Aug 7, 2023

32fcbaa

fprintf confirms data for coordinates and connectivity look correct

KennethEJansen Aug 7, 2023

21b183f

every cgpxx call is wrapped with cgp_error_exit() which I assume mean…

KennethEJansen Aug 7, 2023

b527512

added switch/case statment to handle tets. I have not cross checked…

KennethEJansen Aug 7, 2023

ebf92d8

seems like boundary elements are running through except the mixed wed…

KennethEJansen Aug 8, 2023

d502292

srfID extracted and currently being printed to the screen. Output lo…

KennethEJansen Aug 8, 2023

93919ec

fix: String constant must be char[], not char*

jrwrigh Aug 8, 2023

c49e7a5

style: Misc formatting, trailing spaces

jrwrigh Aug 8, 2023

e54436f

messy debug code that I save to potentially help debug later but next…

KennethEJansen Aug 10, 2023

5457288

cleaned up but failing AllHex 128 element case.

KennethEJansen Aug 10, 2023

d724b54

AllHex working for 2 and 4 processes

KennethEJansen Aug 10, 2023

6e2c075

spurious paste of a free command from who knows where

KennethEJansen Aug 10, 2023

08cf076

now writing the rank of writer as a cell centered value as a test field

KennethEJansen Aug 10, 2023

ed65be9

chef: Write ZoneBC/GridLocations for serial box meshes

jrwrigh Aug 10, 2023

8d066a5

partition of writer helper arrays added to userData. Also added srfI…

KennethEJansen Aug 11, 2023

332982d

merged with JRW work

KennethEJansen Aug 11, 2023

51ee9ea

fix: Correct boco index offset

jrwrigh Aug 11, 2023

0d39b03

style: Fix indent of for loop, remove commented code

jrwrigh Aug 11, 2023

0ed9a51

small cleanup

KennethEJansen Aug 11, 2023

fdefc14

srfID moved out of boundary element topology loop and dimensioned to …

KennethEJansen Aug 11, 2023

ff16778

not so ugly printf statements restored to find issue with tri-face bels.

KennethEJansen Aug 11, 2023

83bc5bc

cut and paste error was the tri-face problem...fixed

KennethEJansen Aug 11, 2023

1fdd6ed

Wedges working. Tets now positive volume. All boundary element have…

KennethEJansen Aug 11, 2023

cccf8b3

mixed wedge and tet volume elemement meshes pass a sniff test of cgns…

KennethEJansen Aug 11, 2023

a6fc037

fixed bug in srfID write for parallel with multiple topologies

KennethEJansen Aug 12, 2023

f68aa5f

parallel BC write almost working

KennethEJansen Aug 12, 2023

0b09db1

gather is not good enough for cg_boco_write but committing the failur…

KennethEJansen Aug 12, 2023

aaa56c5

Gather->Allgather produces correct result....but what other insane pe…

KennethEJansen Aug 12, 2023

2fd47b1

replaced the STL sort which the web says is Nlog_2N in distance betwe…

KennethEJansen Aug 13, 2023

5ef895d

As I test on a bump mesh I realize the help message is a bit out of d…

KennethEJansen Aug 14, 2023

b448217

Initial condition extracted and written to CGNS. For now, PHASTA rest…

KennethEJansen Aug 14, 2023

7cb7309

committing an aborted attempt to find matching faces through matched …

KennethEJansen Aug 16, 2023

cf50e79

SurfID1 and SurfID2 are in the same order to support periodicity of t…

KennethEJansen Aug 17, 2023

1375cc1

CGNS standard for defining periodic interface compplete and tested fo…

KennethEJansen Aug 17, 2023

ae008bd

valgrind now only shows HDF5-MPIO issues

KennethEJansen Aug 18, 2023

449e8e2

split writeBlocksCGNS into three for readability

KennethEJansen Aug 18, 2023

0bf5313

more helper functions to improve readability

KennethEJansen Aug 18, 2023

cb1131a

helper functions broke up remaining code such that all functions fit …

KennethEJansen Aug 19, 2023

9d7f038

Computing translation vector by difference of cenroids of first, orde…

KennethEJansen Aug 19, 2023

449025c

Centroid sort now only done on rank 0 and results bcast back toother…

KennethEJansen Aug 19, 2023

1c8507d

incomplete fix of matchedNodeElmReader...forgot to change the expecte…

KennethEJansen Aug 22, 2023

61d2cbb

hacky way of handling multiple toplogy wrote connectivity without han…

KennethEJansen Aug 22, 2023

f348df8

multi-topology hopefully handled properly now. Passes small tests bu…

KennethEJansen Aug 23, 2023

35426c6

Adding a text file to describe developments, current assumptions/limi…

KennethEJansen Aug 25, 2023

2931f6b

Enums neededed to be compatable with non-Spack builds

KennethEJansen Aug 27, 2023

0d96a63

srfID for BEL only and thus index must be offset by eVolElm

KennethEJansen Aug 27, 2023

f40b140

Merge branch 'CGNS_OneBase' of github.com:SCOREC/core into CGNS_OneBase

KennethEJansen Aug 27, 2023

93d9032

all debugging out encased in 0==1 conditional

KennethEJansen Aug 27, 2023

37d2853

valgrind found some slopiness

KennethEJansen Aug 27, 2023

e530971

added 13 tests

KennethEJansen Aug 28, 2023

71bf7b4

removed some dead code

KennethEJansen Aug 28, 2023

dc05773

fixed matchedNodeElmReader tests to eliminate unused argument 9

KennethEJansen Aug 29, 2023

364895c

fixed swapDoubles-- needed a call to MPI_Finalize to pass with openMPI 4

KennethEJansen Aug 29, 2023

20b9a7d

Testing disables prior CGNS tests that are hardwired to 32 bit

KennethEJansen Sep 1, 2023

dd2b713

Valgrind leaks, added VertexRank, replaced RankOfWriter with CellRank…

KennethEJansen Sep 3, 2023

bdc26b5

checking this in with some extra commented code on my failure to get …

KennethEJansen Sep 3, 2023

d242875

cleaned dead/commented code, valgrind check again, created more helpd…

KennethEJansen Sep 3, 2023

e65dd2c

_rebase was a trainwreck getting things from there back onto this br…

KennethEJansen Jun 6, 2024