just some const correctness

JustinChu · Sep 21, 2022 · a5b2f1e · a5b2f1e
1 parent 6946e0b
commit a5b2f1e
Showing 1 changed file with 6 additions and 7 deletions.
diff --git a/src/FingerPrint.hpp b/src/FingerPrint.hpp
@@ -89,7  89,7 @@ class FingerPrint {
 	/*
 	 * Prints header for summary info
 	 */
-	void printHeader(){
 	void printHeader() const{
 		string outStr = "";
 		outStr  = "#@TK\t";
 		outStr  = std::to_string(m_totalKmers);
@@ -99,26  99,26 @@ class FingerPrint {
 		cout << outStr;
 	}
 
-	void printCountsMax(){
 	void printCountsMax() const{
 		printHeader();
 		string outStr = "";
 		for (size_t i = 0; i < m_alleleIDs.size() ;   i) {
 			outStr.clear();
-			const vector<uint64_t> &allele1 = *m_alleleIDToKmerRef[i];
-			const vector<uint64_t> &allele2 = *m_alleleIDToKmerVar[i];
 			const vector<uint64_t> &allele1 = *m_alleleIDToKmerRef.at(i);
 			const vector<uint64_t> &allele2 = *m_alleleIDToKmerVar.at(i);
 			unsigned maxCountREF = 0;
 			unsigned maxCountVAR = 0;
 			unsigned countSumAT = 0;
 			unsigned countSumCG = 0;
 			for(size_t j = 0; j < allele1.size() ;   j) {
-				unsigned freqAlle = m_counts[allele1.at(j)];
 				unsigned freqAlle = m_counts.at(allele1.at(j));
 				if(maxCountREF < freqAlle){
 					maxCountREF = freqAlle;
 				}
 				countSumAT  = freqAlle;
 			}
 			for(size_t j = 0; j < allele2.size() ;   j) {
-				unsigned freqAlle = m_counts[allele2.at(j)];
 				unsigned freqAlle = m_counts.at(allele2.at(j));
 				if(maxCountVAR < freqAlle){
 					maxCountVAR = freqAlle;
 				}
@@ -140,7  140,6 @@ class FingerPrint {
 			outStr  = "\n";
 			cout << outStr;
 		}
-
 	}
 
 	string printInfoSummary(){