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  • Yale University
  • New Haven

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  • casanovo Public

    Forked from Noble-Lab/casanovo

    De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model

    Python Apache License 2.0 Updated Sep 25, 2024
  • pXg Public

    Forked from HanyangBISLab/pXg
    R Updated Sep 9, 2024
  • Cytof data analysis toolkit

    R 8 MIT License Updated Sep 5, 2024
  • BamQuery Public

    Forked from lemieux-lab/BamQuery

    BamQuery provides RNA-seq quantification for a given peptide (from 8 to 11 residues) in chosen RNA-seq samples (single or bulk).

    Python MIT License Updated Aug 12, 2024
  • AsNeoCaller Public

    Compuational pipeline to call neoantigens derived from aberrant alternative splicing events

    Jupyter Notebook 1 MIT License Updated Feb 5, 2024
  • Converts a VCF file to a FASTA alignment provided a reference genome and a GFF file

    Python GNU General Public License v3.0 Updated Jan 5, 2024
  • PROMISE Public

    Forked from merbllab/PROMISE

    PROMISE is a distributed pipeline to detect post-translation modification on Mass Spectrometry data. The pipeline is solely for academic research, non-commercial or educational purposes; for other …

    Python Other Updated Oct 1, 2022