mOWL: Machine Learning library with Ontologies

AlphaFold 3 inference pipeline.

GenoDesigner: an open-source software for synthetic genome design

A bridge between Obsidian and Github Copilot

🐝 GPTSwarm: LLM agents as (Optimizable) Graphs

The fastest knowledge base for growing teams. Beautiful, realtime collaborative, feature packed, and markdown compatible.

A genome visualization python package for comparative genomics

The OS for your personal finances

Convert genbank files to a swath of other formats

Nanopore demultiplexing, QC and alignment pipeline

High accuracy RAG for answering questions from scientific documents with citations

GPU-accelerated force graph layout and rendering

🤖 The free, Open Source alternative to OpenAI, Claude and others. Self-hosted and local-first. Drop-in replacement for OpenAI, running on consumer-grade hardware. No GPU required. Runs gguf, transf…

An accurate GFF3/GTF lift over pipeline

Tool to plot synteny and structural rearrangements between genomes

Framework to support stitching together multiple models to create effective Computer Vision systems, as accurate or fast as you need them to be.

Send emails from your terminal 📬

Opiniated RAG for integrating GenAI in your apps 🧠 Focus on your product rather than the RAG. Easy integration in existing products with customisation! Any LLM: GPT4, Groq, Llama. Any Vectorstore: …

Test your prompts, agents, and RAGs. Red teaming, pentesting, and vulnerability scanning for LLMs. Compare performance of GPT, Claude, Gemini, Llama, and more. Simple declarative configs with comma…

Code for running RFdiffusion

HungaBunga: Brute-Force all sklearn models with all parameters using .fit .predict!

Platform to experiment with the AI Software Engineer. Terminal based. NOTE: Very different from https://gptengineer.app

Information about how to change the background in Ubuntu

With RNArtist, you construct a collection of RNA structures that can be gathered into RNA families, projects,...

AI on the command line

Similarity search in heterogeneous knowledge graphs using meta paths.

Interact with your documents using the power of GPT, 100% privately, no data leaks

Auxiliary Common Lisp Utilities for Generative Art

A terminal for a more modern age

Show pangenome graphs in an easy way