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Perl 15 12 Updated Dec 13, 2023

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

Python 3,182 718 Updated Sep 11, 2024

《大语言模型》作者:赵鑫,李军毅,周昆,唐天一,文继荣

2,167 149 Updated Apr 22, 2024

Book_7_《机器学习》 | 鸢尾花书:从加减乘除到机器学习;欢迎批评指正

Jupyter Notebook 2,332 448 Updated Sep 11, 2024

mlr3: Machine Learning in R - next generation

R 931 85 Updated Sep 24, 2024

吴恩达老师的机器学习课程个人笔记

HTML 31,724 10,589 Updated Jun 10, 2024

🚀 基于大语言模型和 RAG 的知识库问答系统。开箱即用、模型中立、灵活编排,支持快速嵌入到第三方业务系统。

Python 10,439 1,379 Updated Sep 27, 2024

CNV detection tool for WES data

R 6 Updated Aug 21, 2024

Code for the calculation and implementation of the PC Based epigenetic clocks

R 48 11 Updated Aug 29, 2022

Ultima scripts related to downstream processing of WGS, MRD, methylation analysis

Jupyter Notebook 8 Updated Sep 26, 2024

Code to implement the DunedinPACE scoring algorithm in Illumina 450k or EPIC array data

R 29 4 Updated Feb 20, 2024

Code used in Belsky et al. 2020 eLife "Quantification of the pace of biological aging in humans through a blood test: The DunedinPoAm DNA methylation algorithm"

Stata 2 2 Updated May 5, 2020

R package to implement DunedinPoAm38 in Illumina EPIC and 450k array data

R 8 5 Updated May 8, 2020

This program analyzes methylation levels at six CpG sites in the genome of blood cells to produce a prediction of an individual's biological age, using different machine learning and deep learning …

Jupyter Notebook 23 5 Updated Sep 3, 2021

This project aim to reproduce Sora (Open AI T2V model), we wish the open source community contribute to this project.

Python 11,285 1,008 Updated Sep 20, 2024

Deep Learning with Python 中文翻译

233 93 Updated Oct 19, 2019

A Mendelian approach to variant effect prediction built in keras

Jupyter Notebook 16 6 Updated Aug 26, 2024

a Medical Genetics Sequence Analysis Pipeline

PHP 69 19 Updated Sep 27, 2024

A new tool to infer sex from massively parallel sequencing data.

Python 14 2 Updated Jun 7, 2024

Ancestry and Kinship Tools

C 69 13 Updated Nov 16, 2022

Short-read sequencing tools

C 149 31 Updated Sep 27, 2024

Documentation archive for GATK tools and workflows

HTML 83 51 Updated Jan 6, 2020

The Sentieon Pipeline with Brady's updates and more information on using it for the first time

Nextflow 2 Updated Jan 27, 2023

Example datasets for CNVkit (http://github.com/etal/cnvkit)

Python 19 4 Updated Aug 18, 2018

整理常用的群体遗传学分析流程和脚本

Perl 91 29 Updated May 30, 2024

Issue tracker for Variation Normalizer manuscript work

Jupyter Notebook 2 Updated Aug 27, 2024

This is the development site for Hands-On Programming with R, a book that teaches how to program in R, with hands-on examples. Read the book at https://rstudio-education.github.io/hopr.

CSS 252 320 Updated Jul 30, 2024

Supplementary files for my book, "Bioinformatics Data Skills"

Python 605 360 Updated Oct 15, 2018

Basic Skills (Github/markdown/Linux/R/python)

5 3 Updated Feb 28, 2021
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