-
Notifications
You must be signed in to change notification settings - Fork 22
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Request for xpore result of HEK293T-rep1 #165
Comments
Hi Reza (tagging you here @rezarahman12), I suppose you downloaded HEK293T-WT-rep1 from Zeno do, which is HEK293T-WT-Rep2 from the SG-NEx project. You can obtain the
Thanks! Best wishes, |
Hi @yuukiiwa , I noticed you said the HEK293T-WT-REP1 was from the SG-NEx project. May I ask if all the HEK293T wildtype replicates are from the SG-NEx project? If so, could you tell me the corresponding ID for all the WT REPs? As I downloaded the raw data of HEK293T-WT-REP2, and HEK293T-Mettl3-KO-rep2.tar.gz in SRA but there's something wrong with the uncompressing process. I am thinking about using the data in the SG-NEx project instead. |
Dear xPore team,
I have run xpore on HEK293T-WT-rep1 and HEK293T-Mettl3-KO-rep1.
I wish to compare my output diffmod.table and majority_direction_kmer_diffmod.table files with yours.
Could you share the raw xpore results (diffmod.table and majority_direction_kmer_diffmod.table) of HEK293T-WT-rep1 (KO vs. WT)?
I appreciate your time and help.
Kind regards
Reza
The text was updated successfully, but these errors were encountered: