Change likelihood defaults #1985
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jesnie
approved these changes
Sep 26, 2022
gpflow/config/__config__.py
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| @@ -37,6 37,7 @@ | |||
| * ``GPFLOW_FLOAT``: "float16", "float32", or "float64" | |||
| * ``GPFLOW_POSITIVE_BIJECTOR``: "exp" or "softplus" | |||
| * ``GPFLOW_POSITIVE_MINIMUM``: Any positive float number | |||
| * ``LIKELIHOODS_POSITIVE_MINIMUM``: Any positive float number | |||
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We should probably prepend GPFLOW_ for consistency with the above...
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| * ``LIKELIHOODS_POSITIVE_MINIMUM``: Any positive float number | |
| * ``GPFLOW_LIKELIHOODS_POSITIVE_MINIMUM``: Any positive float number |
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11 tasks
Codecov ReportPatch coverage:
Additional details and impacted files@@ Coverage Diff @@
## develop #1985 /- ##
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Coverage 98.06% 98.16% 0.09%
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Files 97 97
Lines 5437 5458 21
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Hits 5332 5358 26
Misses 105 100 -5
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PR type: bugfix / enhancement
Summary
GPflow had a feature of setting the minimal positive value using
gpflow.config.set_default_positive_minimum. Recently, the default minimum boundary for positive values in scalar likelihoods has been changed to in module global variable with fixed value. That introduced a couple of issues:positive_minimumconfig value, as it was supposed to control all positive values in the GPflow package.configwas supposed to be a single controlling centre.This PR introduces
likelihoods_positive_minimumin config that controls positive values in scalar likelihoods.PR checklist
make format)make check-all)