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tissue-microarray-analysis

Here are 5 public repositories matching this topic...

qupath / qupath

QuPath - Open-source bioimage analysis for research

groovy opencv machine-learning imagej javafx image-processing histology cell-segmentation bioimage-informatics digital-pathology pathology whole-slide-imaging cell-analysis computational-pathology bioimage-analysis tissue-microarray-analysis

Updated Dec 23, 2024
Java

DeepMicroscopy / Cox_AMIL

Code for our BVM workshop submission "Attention-based Multiple Instance Learning for Survival Prediction on Lung Cancer Tissue Microarrays"

deep-learning lung-cancer computational-pathology tissue-microarray-analysis multiple-instance-learning histopathology

Updated Dec 16, 2022
Jupyter Notebook

hanruijiang / TMA-ADA

Tissue Microarray Auto De-Array

medical-imaging pathology tissue-microarray-analysis

Updated Apr 28, 2022
Python

stopsack / batchtma

batchtma: R package to adjust for batch effects, for example between tissue microarrays

measurement-error batch-effects tissue-microarray-analysis

Updated Jun 8, 2024
R

larry080201 / RESTORE_norm

Perform RESTORE normalization on multiplexed imaging data.

normalization tissue-microarray-analysis multiplexed-imaging spatial-omics

Updated Jun 22, 2023
Python

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