Ripser: efficient computation of Vietoris–Rips persistence barcodes
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Mar 5, 2024 - C
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persistent-homology
Here are 101 public repositories matching this topic...
A Lean Persistent Homology Library for Python
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Nov 25, 2024 - C
The GUDHI library is a generic open source C library, with a Python interface, for Topological Data Analysis (TDA) and Higher Dimensional Geometry Understanding.
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Dec 10, 2024 - C
Topological Data Analysis Routines
python topology simplex-algorithm persistent-homology gudhi persistence-landscape tomato-clustering betti-curves
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Dec 21, 2024 - Python
Code for the paper "Topological Autoencoders" by Michael Moor, Max Horn, Bastian Rieck, and Karsten Borgwardt.
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Jan 18, 2022 - Python
Topological Graph Neural Networks (ICLR 2022)
machine-learning pytorch persistent-homology graph-classification node-classification graph-learning pytorch-geometric iclr2022
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Jun 10, 2022 - Python
A library for exploring persistent homology
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Jan 20, 2023 - C
RIVET is a tool for Topological Data Analysis, in particular two-parameter persistent homology.
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Mar 29, 2024 - C
Flexible and efficient persistent homology computation.
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Dec 19, 2024 - Julia
The essence of my research, distilled for reusability. Enjoy 🥃!
deep-learning gpu pytorch persistent-homology topological-data-analysis differentiable-persistent-homology
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Aug 13, 2024 - Jupyter Notebook
A Persistent Weisfeiler–Lehman Procedure for Graph Classification
machine-learning persistent-homology topological-data-analysis graph-kernels weisfeiler-lehman graph-classification
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Jun 9, 2021 - Python
Persistent homology calculation for 1D (scalar time series), 2D (image), and 3D (voxel) arrays
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Sep 9, 2024 - C
SHAPR: Code for "Capturing Shape Information with Multi-Scale Topological Loss Terms for 3D Reconstruction"
deep-learning image-reconstruction pytorch segmentation persistent-homology topological-data-analysis topological-machine-learning cubical-complexes
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Oct 28, 2023 - Python
R pipeline for computing persistent homology in topological data analysis. See https://doi.org/10.21105/joss.00860 for more details.
visualization data-science ggplot2 cran r topology pipeline r-package joss persistent-homology topological-data-analysis tda homology ripser r-packages homology-computation homology-calculations topology-visualization
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Nov 23, 2021 - R
Parallel reduction of boundary matrices for Persistent Homology with CUDA
parallel-computing cuda gpu-computing persistent-homology topological-data-analysis numerical-computation
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Aug 12, 2021 - Cuda
Code for the paper 'Neural Persistence: A Complexity Measure for Deep Neural Networks Using Algebraic Topology'
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Feb 25, 2019 - Python
Unsupervised image segmentation by applying topological data analysis techniques.
image-segmentation unsupervised-learning persistent-homology tda persistence-diagrams gudhi traversal-algorithm rips-vietoris-complexes covering-tree
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Feb 13, 2020 - Python
A package for various computations with simplicial complexes, combinatorial codes, directed complexes and their filtrations.
simplicial-complexes persistent-homology tda homology-computation combinatorial-codes directed-complexes polar-complex codewords dowker-complexes
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Jan 11, 2023 - C
Vectorization of persistence diagrams and approximate Wasserstein distance
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Feb 25, 2020 - Jupyter Notebook
Topological Signal Processing in Python
python signal-processing persistent-homology topological-data-analysis tda tda-python persistent-homology-graphs topological-signal-processing
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Dec 5, 2024 - Jupyter Notebook
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