🍣 🦐 A lightweight nucleotide bacterial ortholog clustering tool
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Updated
Oct 2, 2019 - Perl
🍣 🦐 A lightweight nucleotide bacterial ortholog clustering tool
Automatically identify non-interfering nucleotide linkers between a pegRNA and 3' motif
This is one of my first python scripts for a simple web-based tool that will generate basic biological data from the query DNA sequence.
The active development version of the degenerate bases algorithm.
Random DNA 🧬 nucleotide generator and reverse compliment finder 🔬
Swift package for bioinformatics
Protein to RNA reverse translation
Narrowly, Find sequences including nucleotide(or amino acid) spacers (Broadly, you can find the speific sequences of front and back while ignoring the middle sequences), and Write the result of finding them to csv files.(Language: Python3.9)
DNA or RNA complementary, reverse and reverse complementary sequences generator
API repo: https://github.com/shamseen/pngcat-api
Needleman–Wunsch algorithm implementation in Go.
BIAP - A website that serves as a tool to analyze biological data (nucleotide and aminoacid sequences) and provide biology-related information in one place.
Filter fasta sequences by length
This program determines the optimal alignment of two nucleotide sequences using the Smith–Waterman algorithm. Optimality, of course, is determined by the values of the gap penalty g and the weight matrix (that lists all of the s(ai , bj )). Finally the program outputs the optimal similarity score along with the optimal alignment.
Needleman–Wunsch algorithm implementation in Lua.
Analysis of FASTA ,Protein,DNA sequence.
a Python program to calculate GC content from fasta file
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