Inferring global and local strict molecular clocks using root-to-tip regression
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Jul 18, 2024 - TypeScript
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molecular-clock
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Explore Temporal and Other Phylogenetic Signals
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Mar 6, 2024 - R
Test for a molecular clock based on the phylogenetic tree inferred from single-cell DNA sequenzing data
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Jun 2, 2023 - Python
Nextflow pipeline for estimation of evolutionary rate using Bayesian statistics.
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Aug 12, 2022 - Nextflow
Data and scripts to reproduce the molecular clock dating analyses presented in "Ancient bacterial genomes reveal a formerly unknown diversity of Treponema pallidum strains in early modern Europe (Majander et al.)
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Jul 1, 2020 - Python
The PKS Test software was designed to directly verify whether a phylogeny is clock-like following a Poisson law.
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Sep 3, 2021 - Terra
Methods for the analyses described in Álvarez-Carretero et al. 2019 (https://doi.org/10.1093/sysbio/syz015)
bayesian-inference
phylogeny
geometric-morphometrics
continuous-morpho-chars
procrustes-alignment
molecular-clock
divergence-times
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Jun 19, 2019 - R
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