A python package for simulating motion in continuous environments and spatial cell types (e.g. place cell).

GluPredKit aims to make blood glucose model training and prediction more accessible.

A virus simulation for pandemics based on the SIR-network concept.

A python simulation in jupyter of a simple biological model

A Python Toolbox for COPASI

Flocking algorithm implementation in c

Size-based NPZD model for understanding phytoplankton community size structure

Virtual connectomic datasets in Alzheimer's Disease and aging using whole-brain network dynamics modelling by Arbabyazd et al. (2021)

Python package of computational models relevant to invertebrate processing, from the environment to sensor responses and to deeper neural responses in the invertebrate brain.

A project for Complex Adaptive Systems' computational models

This project aims to be a handler for input creation and running of multiple RICEWQ simulations.

Modelling the phenomenon of "Ecological Suicide", for a final year Master's project in Engineering Mathematics.

Book is published https://frank0434.github.io/MasterThesis/

For the BME MSc of Auth, in the subject of Medical Robotics, the assignment of Team A, was the mathematical description of a 4DOF robotic finger. Matlab was used to create a GUI, and an MQTT server in order to communicate with Team B who created the corresponding model in Unity.

Modelling biological networks course at Aalto university

2D tumor angiogenesis simulation using Python and Jupyter Notebooks. Models explore tumor cell diffusion, proliferation, and vascular irrigation. Includes multiple initial conditions, diffusion coefficients, and dynamic blood vessel growth for tumor simulation.

Optimization of an step for Biped Walker with 5 joints and heel-strike modell

Modelling and Optimization of Models with a focus on Healthcare and Biological Networks