ImageJ macros and scripts written at the imaging facility MRI
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Updated
Dec 11, 2024 - Jupyter Notebook
ImageJ macros and scripts written at the imaging facility MRI
ImageJ's plugin for directional analysis in images: color-coded analysis, distribution of orientation, vector field, keypoint detection
Flow-Registration toolbox for 2P motion compensation
Plugins for bone image analysis
ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing
Collaborative Approach for eNhanced Denoising under Low-light Excitation
Imagej macro to calculate the MTF based on a knife edge measurement
Image processing software for textbooks by W. Burger & M. Burge
Curve tracing ImageJ plugin
Detection of Molecules plugin for ImageJ, Utrecht University
ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)
ImageJ library to detect and analyse connected components (blobs) in binary images
ImageJ plugin to read xrm files.
FijiRelax: 3D t multi-echo spin-echo sequences MRI analysis
Raw Bayer pattern to color image converters
Fiji / ImageJ plugin for Imaging Alignment. This plugin manages two types of alignment: Manual Alignment and Automatic Alignment.
An ImageJ plugin to quantify ciliary shape, length, and fluorescence.
A set of ImageJ plugins to quantify dynamics, morphology, and fluorescence of microglial cells.
A plugin to combine power of mouse and keyboard control with image processing and analysis tools in ImageJ
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