2 Issues closed by 1 person

• input.size cannot work

  #3000 closed Jan 11, 2025

• Use storage plugin and executor plugin toget

  #2953 closed Jan 11, 2025

5 Issues opened by 5 people

• global conda directive error: The package snakemake-storage-plugin-http is not installed

  #3252 opened Jan 13, 2025

• Support for `uv` in the integrated package management?

  #3251 opened Jan 13, 2025

• Catch error codes of commands executed under the shell directive

  #3250 opened Jan 13, 2025

• error libmamba Non-conda folder exists at prefix error while running snakemake

  #3249 opened Jan 11, 2025

• The issue with --apptainer-prefix and -d

  #3248 opened Jan 11, 2025

10 Unresolved conversations

Sometimes conversations happen on old items that aren’t yet closed. Here is a list of all the Issues and Pull Requests with unresolved conversations.

• feat: WIP Logging refactor

  #3107 commented on Jan 13, 2025 • 5 new comments

• Two checkpoint workflow fails to output all files in latest version 8.18.1

  #3036 commented on Jan 10, 2025 • 0 new comments

• Job scripts that allow batch execution

  #2968 commented on Jan 13, 2025 • 0 new comments

• `os.relpath` fails when `--conda-prefix` points to a different drive on Windows

  #2964 commented on Jan 13, 2025 • 0 new comments

• Snakemake spontaneously interrupts jobs when running singularity with nohup

  #2954 commented on Jan 13, 2025 • 0 new comments

• How can one check whether the current run is a dryrun?

  #2948 commented on Jan 13, 2025 • 0 new comments

• Support standard Python virtual env. for rules

  #3124 commented on Jan 13, 2025 • 0 new comments

• Chained checkpoints are not evaluated correctly

  #2958 commented on Jan 13, 2025 • 0 new comments

• Invalid SyntaxWarning: invalid escape sequence

  #3232 commented on Jan 13, 2025 • 0 new comments

• "ancient" not working with checkpoints

  #2962 commented on Jan 13, 2025 • 0 new comments