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  1. grenepipe grenepipe Public

    A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles.

    Python 95 21

  2. deepbiosphere deepbiosphere Public

    Python 20 1

  3. grene grene Public

    Forked from MoisesExpositoAlonso/grene

    the R package of the GrENE-net evolution experiment (grene-net.org)

    Jupyter Notebook 1 1

  4. genemaps genemaps Public

    Forked from MoisesExpositoAlonso/genemaps

    R

  5. grenepool grenepool Public

    Forked from MoisesExpositoAlonso/grenepool

    Code for pool seq analyses of the GrENE-net project (grene-net.org)

    Python

  6. popgensim popgensim Public

    Forked from MoisesExpositoAlonso/popgensim

    Interactive Shiny app plotting simulations under 1-loci Wright Fisher populations

    HTML

Repositories

Showing 10 of 19 repositories
  • grenepipe Public

    A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles.

    moiexpositoalonsolab/grenepipe’s past year of commit activity
    Python 95 GPL-3.0 21 3 0 Updated Dec 17, 2024
  • grenedalf Public Forked from lczech/grenedalf

    Toolkit for Population Genetic Statistics from Pool-Sequenced Samples, e.g., in Evolve and Resequence experiments

    moiexpositoalonsolab/grenedalf’s past year of commit activity
    C 0 GPL-3.0 3 0 0 Updated Oct 23, 2024
  • deepbiosphere Public
    moiexpositoalonsolab/deepbiosphere’s past year of commit activity
    Python 20 MIT 1 5 1 Updated Sep 16, 2024
  • HapFIRE Public Forked from xingwu2/HapFIRE
    moiexpositoalonsolab/HapFIRE’s past year of commit activity
    Python 0 Apache-2.0 1 0 0 Updated Aug 21, 2024
  • Athaliana_Natural_Selection_Conflict Public Forked from ruffleymr/Athaliana_Natural_Selection_Conflict

    Analyses of Arabidopsis thaliana phenotype, climate, and genotype data associated with Ruffley et. al 2023

    moiexpositoalonsolab/Athaliana_Natural_Selection_Conflict’s past year of commit activity
    0 1 0 0 Updated Jun 11, 2024
  • grene Public Forked from MoisesExpositoAlonso/grene

    the R package of the GrENE-net evolution experiment (grene-net.org)

    moiexpositoalonsolab/grene’s past year of commit activity
    Jupyter Notebook 1 2 0 0 Updated Mar 8, 2024
  • moiexpositoalonsolab.github.io Public Forked from academicpages/academicpages.github.io

    Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

    moiexpositoalonsolab/moiexpositoalonsolab.github.io’s past year of commit activity
    HTML 0 MIT 44,780 0 0 Updated Oct 31, 2023
  • crisp-public Public Forked from rosikand/crisp

    Image of final CS197 project code

    moiexpositoalonsolab/crisp-public’s past year of commit activity
    Python 0 1 0 0 Updated Jun 17, 2023
  • grenephase1-paper Public
    moiexpositoalonsolab/grenephase1-paper’s past year of commit activity
    0 0 0 0 Updated Mar 1, 2023
  • mar2 Public

    Repository of MAR2.0 paper

    moiexpositoalonsolab/mar2’s past year of commit activity
    0 0 0 0 Updated Feb 16, 2023
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