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Merge imports with existing gene-centric models #47
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@vanaukenk this sounds a bit like a one-off, is that right? If not, then we should probably make sure all the curation groups are on the same page with regards to this Noctua naming convention and its expected consequences. If it is a limited, one-time thing, I would suggest keeping the priority down below the completion of the general purpose importer which, if finished, would allow us to get past the need for one-offs like this and move on with the next phase of the project - where I presume you would simply open that model up for editing directly. |
@goodb - If it's possible to do this, then yes, I would discuss this with the other curation groups, so that it could be applied more generally upon import. |
@vanaukenk anything is possible :). (And I don't think this very hard, but at the same time its work that really shouldn't need to be done at all so would prefer it be avoided if possible.) |
Hm, that is an interesting question. I suppose we could export this existing model from noctua-dev, then read it into the same python library ( I could definitely see how this could get messy with deciding whether a GPAD annotation is already in the model. |
Hmmmm, I thought I was proposing something much simpler :-). |
Oh right, sorry @vanaukenk ! If we don't need to worry about matching up the annotations already in the model then it should be waaay easier. |
Thinking longer term, what would happen when we import another group's annotations to a gene that already has a gene-centric model in Noctua? |
ohh. SGD is very interested in this |
I'm creating some new annotations in Noctua that are just part of gene-by-gene curation, i.e. not part of a larger GO-CAM model.
I've named this model according to our import conventions, i.e. WB:WBGene00003480.
When we actually import the annotations into Noctua, it would be nice if we could merge other annotations to WBGene00003480 into that existing model.
Would that be possible?
Thx.
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