#!/bin/tcsh

# either include the names of the gifti files on the command line,

# or be sitting in the directory with them

set skip_ts = 0

set prog = gifti_tool # was gifti_test

# if the user specifies -nots, skip the time series dataset

set narg = $#argv

set base = 1

set gt_comp = 0

if ( $narg >= 1 ) then

if ( "$argv[1]" == "-help" ) then

echo "usage: gifti.test.io [-nots] [-gt_compare] [files...]"

echo ""

echo "option:"

echo " -nots : do not process *time_series*.gii"

echo ""

echo "examples:"

echo " gifti.test.io"

echo " gifti.test.io *.gii"

echo " gifti.test.io -nots"

echo " gifti.test.io -nots *.gii"

exit

else if ( "$argv[1]" == "-gt_compare" ) then

@ narg --

@ base

set gt_comp = 1

else if ( "$argv[1]" == "-nots" ) then

@ narg --

@ base

set skip_ts = 1

endif

endif

echo using `which $prog` ...

if ( $narg >= 1 ) then

set files = ( $argv[$base-] )

else

echo applying default gifti files...

set files = ( gifti.*.gii )

endif

echo ""

foreach file ( $files )

echo -n "$file : "

if ( $skip_ts && "$file" =~ *time_series*.gii ) then

echo "skipping ..."

continue

endif

$prog -infile $file -no_updates -write_gifti new.gii

if( $status ) then

echo "** FAILURE : $prog -infile $file -no_updates -write_gifti new.gii"

else

if ( $gt_comp ) then

gifti_tool -compare_gifti -compare_data -infiles $file new.gii \

>& /dev/null

set result = $status

if ( $result ) echo '** differs **'

else

cmp $file new.gii

set result = $status

endif

if( ! $result ) echo okay

endif

end