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17 Open 26 Closed
17 Open 26 Closed
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Issues list

R installed in home dir breaks Singularity containers bug Something isn't working
#43 opened Mar 3, 2020 by varshini712
2
Remove 'done' channels enhancement New feature or request
#42 opened Oct 31, 2019 by stevekm
Need to refactor channel create method enhancement New feature or request
#41 opened Oct 31, 2019 by stevekm
Updated samplesheets do not seem to always work correctly with 'resume' bug Something isn't working enhancement New feature or request
#40 opened Oct 29, 2019 by stevekm
Sometimes values loaded from JSON are not available inside processes bug Something isn't working
#39 opened Oct 29, 2019 by stevekm
Evaluate Nextflow Tower integration enhancement New feature or request
#38 opened Oct 21, 2019 by stevekm
Need to adjust memory allocation for jobs enhancement New feature or request
#37 opened Oct 21, 2019 by stevekm
Need output validator enhancement New feature or request
#35 opened Oct 16, 2019 by stevekm
Refactor variant calling processes to use separate normalize_vcf steps enhancement New feature or request
#32 opened Aug 28, 2019 by stevekm
rename karyotype plots enhancement New feature or request
#30 opened Aug 26, 2019 by stevekm
Need scope writeup enhancement New feature or request
#29 opened Aug 26, 2019 by stevekm
re-setup vaf distribution plot enhancement New feature or request
#28 opened Aug 23, 2019 by stevekm
@stevekm
Need to update coverage cutoffs enhancement New feature or request
#27 opened Aug 12, 2019 by stevekm
@stevekm
sometimes custom analysis report does not run bug Something isn't working
#26 opened Jul 30, 2019 by stevekm
2
Errors in reformat-vcf-table.py return exit code 0 bug Something isn't working
#24 opened Jul 10, 2019 by stevekm
2
Need writeup for CNV Pool reference file generation workflow enhancement New feature or request
#22 opened May 23, 2019 by stevekm
@varshini712
remove process lofreq_filter_reformat from config good first issue Good for newcomers
#21 opened May 15, 2019 by stevekm
@varshini712
ProTip! Follow long discussions with comments:>50.