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@FredHutch

Fred Hutch Cancer Center

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  1. Oncoscape Oncoscape Public

    a web application to apply/develop analysis tools for Molecular and Clinical data

    JavaScript 179 45

  2. motuz motuz Public

    Motuz - A web based infrastructure for large scale data movements between on-premise and cloud

    JavaScript 104 12

  3. SEACR SEACR Public

    SEACR: Sparse Enrichment Analysis for CUT&RUN

    Shell 102 45

  4. slurm-examples slurm-examples Public

    examples of using slurm in life sciences workflows using posix file systems and object storage

    Shell 39 14

  5. proxmox-tools proxmox-tools Public

    prox command line interface for proxmox and other tools and customizations

    Python 38 5

  6. wiki wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    HTML 36 46

Repositories

Showing 10 of 581 repositories
  • VISCtemplates Public

    Tools for writing reproducible reports at VISC

    FredHutch/VISCtemplates’s past year of commit activity
    R 6 2 36 4 Updated Nov 1, 2024
  • wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    FredHutch/wiki’s past year of commit activity
    HTML 36 46 64 9 Updated Nov 1, 2024
  • shiny-cromwell Public

    Shiny app for interacting with the Fred Hutch instances of Cromwell. Contact Taylor Firman.

    FredHutch/shiny-cromwell’s past year of commit activity
    R 3 MIT 3 49 4 Updated Oct 31, 2024
  • seatrac-hackday-2024 Public

    Materials for TRAC-sponsored TB Hackday 2024

    FredHutch/seatrac-hackday-2024’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Oct 31, 2024
  • Wellington-et-al-2024 Public

    This is the code used for data analysis in the Wellington et al. 2024 paper.

    FredHutch/Wellington-et-al-2024’s past year of commit activity
    R 0 0 0 0 Updated Oct 31, 2024
  • gimap Public

    Genetic Interaction MAPping for dual target CRISPR screens

    FredHutch/gimap’s past year of commit activity
    HTML 0 0 19 0 Updated Oct 30, 2024
  • pgmap Public
    FredHutch/pgmap’s past year of commit activity
    R 0 1 3 4 Updated Oct 30, 2024
  • tfcb_2024 Public

    Course website for MCB 536 Tools for Computational Biology Fall 2024

    FredHutch/tfcb_2024’s past year of commit activity
    Jupyter Notebook 3 17 0 2 Updated Oct 29, 2024
  • pca-salvage-therapy-predictimands Public

    Code supporting "Predictimands for Salvage Therapy in Biochemically Recurrent Prostate Cancer Using Joint Longitudinal and Failure Time Models"

    FredHutch/pca-salvage-therapy-predictimands’s past year of commit activity
    0 0 0 0 Updated Oct 27, 2024
  • rna-qc-tool Public

    A Shiny app for interactive visualization of RNA quality control statistics

    FredHutch/rna-qc-tool’s past year of commit activity
    R 1 0 0 0 Updated Oct 22, 2024
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