Chado related code for FlyBase

data_class_counts.pl - A script for calculating counts of FlyBase data classes for a release.

merge_chado_alliance_gene_summary_counts.py - A script for calculating counts of various types of gene summaries by gene.

gene_summary_stats.sql - SQL used for generating gene summary counts from Chado

extend_ec_data.pl - A script for pulling in Enzyme metadata and adding it to EC dbxref entries in Chado.

conserved_darkened_genes.py -

A script for extracting genes with sparse GO annotations and which are highly conserved across many species.

IDs - FlyBase ID related functions for Chado.