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| Pithovirus sibericum | |
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| Virus classification | |
| Group: | Group I (dsDNA)
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| Family: | |
| Genus: | Pithovirus
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| Species: | P. sibericum
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Pithovirus is a genus of giant virus known from one species, Pithovirus sibericum, which infects amoebas.[1][2] It is a double-stranded DNA virus, and is a member of the nucleocytoplasmic large DNA viruses clade. It was first described in 2014 after a viable specimen was found in a 30,000-year-old ice core harvested from Siberia, Russia's permafrost.
Description
[edit]A specimen of Pithovirus measures approximately 1.5 µm in length and 0.5 µm in diameter, making it the largest virus yet found. It is 50% larger than the pandoraviruses, the previous largest known viruses.[3] The species has a thick, oval wall with an opening at one end. Internally, its structure resembles a honeycomb.[1]
The genome of Pithovirus contains approximately 500 distinct genes, more than a typical virus but an order of magnitude less than found in Pandoravirus.[3] Thus, its genome is far less densely packed than any other known virus. Two-thirds of its proteins are unlike those of other viruses. Despite the physical similarity with Pandoravirus, the Pithovirus genome sequence reveals that it is barely related to that virus, but more closely resembles members of Marseilleviridae, Megaviridae and Iridoviridae.[4] These families all contain large icosahedral viruses with DNA genomes. The Pithovirus genome has 36% GC-content, similar to the Megaviridae, in contrast to greater than 61% for pandoraviruses.[5]
Replication
[edit]The viral genome encodes all the proteins needed to produce mRNA; these proteins are present in the purified virions.[4] Pithovirus therefore undergoes its entire replication cycle in its host's cytoplasm, like other large DNA viruses such as poxviruses[4] and the Megaviridae (although unlike Pandoravirus),[5] rather than the more typical method of taking over the host's nucleus.[1][4][6]
Discovery
[edit]Pithovirus sibericum was discovered in a 30,000-year-old sample of Siberian permafrost by Chantal Abergel and Jean-Michel Claverie of Aix-Marseille University.[1] The virus was discovered buried 30 m (98 ft) below the surface of a late Pleistocene sediment.[2][4] It was found when riverbank samples harvested in 2000 were exposed to amoebas.[7] The amoebas started dying and when examined were found to contain giant virus specimens. The genus name Pithovirus, a reference to large storage containers of ancient Greece known as pithos, was chosen to describe the new species. The authors said they got the idea to probe permafrost samples for new viruses after reading about an experiment that revived a similar aged seed of Silene stenophylla two years earlier.[1] The Pithovirus findings were published in the Proceedings of the National Academy of Sciences in March 2014.[3][5]
Even though the virus is harmless to humans, its viability after being frozen for millennia has raised concerns that global climate change and tundra drilling operations could lead to previously undiscovered and potentially pathogenic viruses being unearthed.[3]
See also
[edit]
References
[edit]- ^ a b c d e Yong, Ed (3 March 2014). "Giant virus resurrected from 30,000-year-old ice : Nature News & Comment". Nature. doi:10.1038/nature.2014.14801. S2CID 87146458.
- ^ a b Morelle, Rebecca (3 March 2014). "30,000-year-old giant virus 'comes back to life'". BBC News.
- ^ a b c d Sirucek, Stefan (3 March 2014). "Ancient "Giant Virus" Revived From Siberian Permafrost". National Geographic.
- ^ a b c d e Racaniello, Vincent (4 March 2014). "Pithovirus: Bigger than Pandoravirus with a smaller genome". Virology Blog.
- ^ a b c Legendre, M.; Bartoli, J.; Shmakova, L.; Jeudy, S.; Labadie, K.; Adrait, A.; Lescot, M.; Poirot, O.; Bertaux, L.; Bruley, C.; Coute, Y.; Rivkina, E.; Abergel, C.; Claverie, J.-M. (2014). "Thirty-thousand-year-old distant relative of giant icosahedral DNA viruses with a pandoravirus morphology". Proc. Natl. Acad. Sci. U.S.A. To appear (11): 4274–9. doi:10.1073/pnas.1320670111. PMC 3964051. PMID 24591590.
- ^ Coghlan, Andy (3 March 2014). "Biggest-ever virus revived from Stone Age permafrost". NewScientist. Archived from the original on 5 March 2014.
- ^ Zimmer, Carl (3 March 2014). "Out of Siberian Ice, a Virus Revived". The New York Times.
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Category:Nucleocytoplasmic large DNA viruses Category:Species described in 2014