Berkelbacteria (formerly ACD58) is a bacterial phylum with candidate status, meaning there are no cultured representatives for this group. It is part of the Candidate Phyla Radiation.
Berkelbacteria | |
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Scientific classification | |
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Phylum: | "Berkelbacteria" Wrighton et al. 2014
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Berkelbacteria was first reported in 2012, at which time it was classified as a divergent lineage of Parcubacteria (OD1) and referred to as ACD58.[1] It was proposed as a phylum in 2014.[2] Representatives of this phylum have been detected in a variety of environments, including a deep thermokarst lake in the Sasapimakwananisikw River Valley (QC, Canada),[3] an acetate-amended alluvial aquifer adjacent to the Colorado River (CO, USA),[2] and marine sediments from the Peru Margin seafloor.[4]
References
edit- ^ Wrighton, Kelly C.; Thomas, Brian C.; Sharon, Itai; Miller, Christopher S.; Castelle, Cindy J.; VerBerkmoes, Nathan C.; Wilkins, Michael J.; Hettich, Robert L.; Lipton, Mary S.; Williams, Kenneth H.; Long, Philip E. (2012-09-28). "Fermentation, Hydrogen, and Sulfur Metabolism in Multiple Uncultivated Bacterial Phyla". Science. 337 (6102): 1661–1665. Bibcode:2012Sci...337.1661W. doi:10.1126/science.1224041. ISSN 0036-8075. PMID 23019650. S2CID 10362580.1661-1665&rft.date=2012-09-28&rft_id=https://api.semanticscholar.org/CorpusID:10362580#id-name=S2CID&rft_id=info:bibcode/2012Sci...337.1661W&rft.issn=0036-8075&rft_id=info:doi/10.1126/science.1224041&rft_id=info:pmid/23019650&rft.aulast=Wrighton&rft.aufirst=Kelly C.&rft.au=Thomas, Brian C.&rft.au=Sharon, Itai&rft.au=Miller, Christopher S.&rft.au=Castelle, Cindy J.&rft.au=VerBerkmoes, Nathan C.&rft.au=Wilkins, Michael J.&rft.au=Hettich, Robert L.&rft.au=Lipton, Mary S.&rft.au=Williams, Kenneth H.&rft.au=Long, Philip E.&rft_id=https://www.science.org/doi/10.1126/science.1224041&rfr_id=info:sid/en.wikipedia.org:Berkelbacteria" class="Z3988">
- ^ a b Wrighton, Kelly C.; Castelle, Cindy J.; Wilkins, Michael J.; Hug, Laura A.; Sharon, Itai; Thomas, Brian C.; Handley, Kim M.; Mullin, Sean W.; Nicora, Carrie D.; Singh, Andrea; Lipton, Mary S. (July 2014). "Metabolic interdependencies between phylogenetically novel fermenters and respiratory organisms in an unconfined aquifer". The ISME Journal. 8 (7): 1452–1463. doi:10.1038/ismej.2013.249. ISSN 1751-7370. PMC 4069391. PMID 24621521.1452-1463&rft.date=2014-07&rft_id=https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4069391#id-name=PMC&rft.issn=1751-7370&rft_id=info:pmid/24621521&rft_id=info:doi/10.1038/ismej.2013.249&rft.aulast=Wrighton&rft.aufirst=Kelly C.&rft.au=Castelle, Cindy J.&rft.au=Wilkins, Michael J.&rft.au=Hug, Laura A.&rft.au=Sharon, Itai&rft.au=Thomas, Brian C.&rft.au=Handley, Kim M.&rft.au=Mullin, Sean W.&rft.au=Nicora, Carrie D.&rft.au=Singh, Andrea&rft.au=Lipton, Mary S.&rft_id=https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4069391&rfr_id=info:sid/en.wikipedia.org:Berkelbacteria" class="Z3988">
- ^ Vigneron, Adrien; Cruaud, Perrine; Langlois, Valérie; Lovejoy, Connie; Culley, Alexander I.; Vincent, Warwick F. (2020). "Ultra-small and abundant: Candidate phyla radiation bacteria are potential catalysts of carbon transformation in a thermokarst lake ecosystem". Limnology and Oceanography Letters. 5 (2): 212–220. doi:10.1002/lol2.10132. ISSN 2378-2242.212-220&rft.date=2020&rft_id=info:doi/10.1002/lol2.10132&rft.issn=2378-2242&rft.aulast=Vigneron&rft.aufirst=Adrien&rft.au=Cruaud, Perrine&rft.au=Langlois, Valérie&rft.au=Lovejoy, Connie&rft.au=Culley, Alexander I.&rft.au=Vincent, Warwick F.&rft_id=https://doi.org/10.1002%2Flol2.10132&rfr_id=info:sid/en.wikipedia.org:Berkelbacteria" class="Z3988">
- ^ Orsi, William D.; Richards, Thomas A.; Francis, Warren R. (January 2018). "Predicted microbial secretomes and their target substrates in marine sediment". Nature Microbiology. 3 (1): 32–37. doi:10.1038/s41564-017-0047-9. ISSN 2058-5276. PMID 29062087. S2CID 3355333.32-37&rft.date=2018-01&rft.issn=2058-5276&rft_id=https://api.semanticscholar.org/CorpusID:3355333#id-name=S2CID&rft_id=info:pmid/29062087&rft_id=info:doi/10.1038/s41564-017-0047-9&rft.aulast=Orsi&rft.aufirst=William D.&rft.au=Richards, Thomas A.&rft.au=Francis, Warren R.&rft_id=https://www.nature.com/articles/s41564-017-0047-9&rfr_id=info:sid/en.wikipedia.org:Berkelbacteria" class="Z3988">