Accurate sample inference from amplicon data with single nucleotide resolution
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Updated
May 27, 2024 - R
Accurate sample inference from amplicon data with single nucleotide resolution
A taxonomic toolbelt for R
Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data
Protist Ribosomal Reference database (PR2) - SSU rRNA gene database
The Global Virome in One Network
World Register of Marine Species R client
NCBI taxonomic identifier (taxid) changelog, including taxids deletion, new adding, merge, reuse, and rank/name changes.
taxonomy data from Wikipedia/Wikidata/Wikispecies
R package for standardizing and harmonizing scientific names of plants and animals
An R package to generate species range maps based on ecoregions and a user-friendly GBIF wrapper
📓 Companion code for Grenié et al. 2022 MEE "Harmonizing taxon names in biodiversity data: a review of tools, databases, and best practices" preprint: 10.32942/osf.io/e3qnz
Bacterial taxonomy construction and evaluation in R
Parse scientific names using gnparser (https://github.com/gnames/gnparser)
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